Chromosomal Breakage Syndromes Associated with Immunodeficiency
Reyhan GÜMÜŞBURUNa , Ömür ARDENİZa
aEge University Faculty of Medicine, Department of Pulmonary Medicine, Division of Immunology and Allergy Diseases, İzmir, Türkiye
Gümüşburun R, Ardeniz Ö. Chromosomal breakage syndromes associated with immunodeficiency. Çölkesen F, ed. Primary Immunodeficiency Diseases in Adults. 1st ed. Ankara: Türkiye Klinikleri; 2024. p.67-74.
ABSTRACT
Chromosome instability syndromes are characterized by high rates of chromosomal breaks and failure to maintain genomic integrity due to mutations in genes encoding enzymes required for DNA repair. These patients have varying degrees of immunodeficiency, cancer, neurodegeneration, developmental abnormalities, and premature aging. In this review, the relationship between DNA damage and repair mechanisms and the immune system, and some well-known DNA repair pathway defects are discussed. In addition, some important issues that should be considered in the treatment approach in these cases are also discussed. DNA pathway repair defects may present as severe combined immunodeficiency (SCID), and early bone marrow transplantation is essential in these cases. Because of the high morbidity and mortality rates for transplantation in a group of DNA repair defects, it is essential to apply newborn screening programs and to modify the pre-transplant preparation regimens due to radiochemosensitivity.
Keywords: Chromosome instability syndromes; immunodeficiencies; DNA repair disorders; ataxia-telangiectasia; Nijmegen Breakage syndrome; Bloom syndrome; Fanconi anemia
Referanslar
- Chatterjee N, Walker GC. Mechanisms of DNA damage, repair, and mutagenesis. Environ Mol Mutagen. 2017;58(5):235-63. [Crossref] [PubMed] [PMC]
- Nakamura J, Nakamura M. DNA-protein crosslink formation by endogenous aldehydes and AP sites. DNA Repair (Amst). 2020;88:102806. [Crossref] [PubMed] [PMC]
- García-de-Teresa B, Rodríguez A, Frias S. Chromosome Instability in Fanconi Anemia: From Breaks to Phenotypic Consequences. Genes (Basel). 2020;11(12):1528. [Crossref] [PubMed] [PMC]
- Gennery AR, Cant AJ, Jeggo PA. Immunodeficiency associated with DNA repair defects. Clin Exp Immunol. 2000;121(1):1-7. [Crossref] [PubMed] [PMC]
- Alberts B, Johnson A, Lewis J, et al. Molecular Biology of the Cell. 4th edition. New York: Garland Science; 2002. Available from: [Link]
- Slatter MA, Gennery AR. Update on DNA-Double Strand Break Repair Defects in Combined Primary Immunodeficiency. Curr Allergy Asthma Rep. 2020;20(10):57. [Crossref] [PubMed] [PMC]
- Slatter MA, Gennery AR. Primary immunodeficiencies associated with DNA-repair disorders. Expert Rev Mol Med. 2010;12:e9. [Crossref] [PubMed]
- Ochi T, Blackford AN, Coates J, Jhujh S, Mehmood S, Tamura N, et al. DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair. Science. 2015;347(6218):185-8. [Crossref] [PubMed] [PMC]
- Xing M, Yang M, Huo W, Feng F, Wei L, Jiang W, et al. Interactome analysis identifies a new paralogue of XRCC4 in non-homologous end joining DNA repair pathway. Nat Commun. 2015;6:6233. [Crossref] [PubMed] [PMC]
- Craxton A, Somers J, Munnur D, Jukes-Jones R, Cain K, Malewicz M. XLS (c9orf142) is a new component of mammalian DNA double-stranded break repair. Cell Death Differ. 2015;22(6):890-7. [Crossref] [PubMed] [PMC]
- Gennery A. Recent advances in understanding RAG deficiencies. F1000Res. 2019;8:F1000 Faculty Rev-148. [Crossref] [PubMed] [PMC]
- Felgentreff K, Du L, Weinacht KG, Dobbs K, Bartish M, Giliani S, et al. Differential role of nonhomologous end joining factors in the generation, DNA damage response, and myeloid differentiation of human induced pluripotent stem cells. Proc Natl Acad Sci U S A. 2014;111(24):8889-94. [Crossref] [PubMed] [PMC]
- Musio A, Marrella V, Sobacchi C, Rucci F, Fariselli L, Giliani S, et al. Damaging-agent sensitivity of Artemis-deficient cell lines. Eur J Immunol. 2005;35(4):1250-6. [Crossref] [PubMed]
- Evans PM, Woodbine L, Riballo E, Gennery AR, Hubank M, Jeggo PA. Radiation-induced delayed cell death in a hypomorphic Artemis cell line. Hum Mol Genet. 2006;15(8):1303-11. [Crossref] [PubMed]
- Seol JH, Shim EY, Lee SE. Microhomology-mediated end joining: Good, bad and ugly. Mutat Res. 2018;809:81-7. [Crossref] [PubMed] [PMC]
- Iliakis G, Murmann T, Soni A. Alternative end-joining repair pathways are the ultimate backup for abrogated classical non-homologous end-joining and homologous recombination repair: Implications for the formation of chromosome translocations. Mutat Res Genet Toxicol Environ Mutagen. 2015;793:166-75. [Crossref] [PubMed]
- Hakem R. DNA-damage repair; the good, the bad, and the ugly. EMBO J. 2008;27(4):589-605. [Crossref] [PubMed] [PMC]
- Tangye SG, Al-Herz W, Bousfiha A, Cunningham-Rundles C, Franco JL, Holland SM, et al. Human Inborn Errors of Immunity: 2022 Update on the Classification from the International Union of Immunological Societies Expert Committee. J Clin Immunol. 2022;42(7):1473-507. [Crossref] [PubMed] [PMC]
- Bajin İY, Ayvaz DÇ, Ünal S, Özgür TT, Çetin M, Gümrük F, et al. Atypical combined immunodeficiency due to Artemis defect: a case presenting as hyperimmunoglobulin M syndrome and with LGLL. Mol Immunol. 2013;56(4):354-7. [Crossref] [PubMed]
- Ege M, Ma Y, Manfras B, Kalwak K, Lu H, Lieber MR, et al. Omenn syndrome due to ARTEMIS mutations. Blood. 2005;105(11):4179-86. [Crossref] [PubMed]
- Moshous D, Pannetier C, Chasseval Rd Rd, Deist Fl Fl, Cavazzana-Calvo M, Romana S, et al. Partial T and B lymphocyte immunodeficiency and predisposition to lymphoma in patients with hypomorphic mutations in Artemis. J Clin Invest. 2003;111(3):381-7. [Crossref] [PubMed] [PMC]
- Volk T, Pannicke U, Reisli I, Bulashevska A, Ritter J, Björkman A, et al. DCLRE1C (ARTEMIS) mutations causing phenotypes ranging from atypical severe combined immunodeficiency to mere antibody deficiency. Hum Mol Genet. 2015;24(25):7361-72. [Crossref] [PubMed] [PMC]
- Lee PP, Woodbine L, Gilmour KC, Bibi S, Cale CM, Amrolia PJ, et al. The many faces of Artemis-deficient combined immunodeficiency - Two patients with DCLRE1C mutations and a systematic literature review of genotype-phenotype correlation. Clin Immunol. 2013;149(3):464-74. [Crossref] [PubMed]
- Ghadimi S, Jamee M, Abolhassani H, Parvaneh N, Rezaei N, Delavari S, et al. Demographic, clinical, immunological, and molecular features of iranian national cohort of patients with defect in DCLRE1C gene. Allergy Asthma Clin Immunol. 2023;19(1):13. [Crossref] [PubMed] [PMC]
- Morio T. Recent advances in the study of immunodeficiency and DNA damage response. Int J Hematol. 2017;106(3):357-65. [Crossref] [PubMed]
- Schuetz C, Neven B, Dvorak CC, Leroy S, Ege MJ, Pannicke U, et al. SCID patients with ARTEMIS vs RAG deficiencies following HCT: increased risk of late toxicity in ARTEMIS-deficient SCID. Blood. 2014;123(2):281-9. Erratum in: Blood. 2018;132(23):2527. [Crossref]
- Wolska-Kuśnierz B, Gennery AR. Hematopoietic Stem Cell Transplantation for DNA Double Strand Breakage Repair Disorders. Front Pediatr. 2020;7:557. [Crossref] [PubMed] [PMC]
- Cowan MJ, Yu J, Facchino J, Fraser-Browne C, Sanford U, Kawahara M, et al. Lentiviral Gene Therapy for Artemis-Deficient SCID. N Engl J Med. 2022;387(25):2344-55. [Crossref] [PubMed] [PMC]
- Rothblum-Oviatt C, Wright J, Lefton-Greif MA, McGrath-Morrow SA, Crawford TO, Lederman HM. Ataxia telangiectasia: a review. Orphanet J Rare Dis. 2016;11(1):159. [Crossref] [PubMed] [PMC]
- Stracker TH, Roig I, Knobel PA, Marjanović M. The ATM signaling network in development and disease. Front Genet. 2013;4:37. [Crossref] [PubMed] [PMC]
- Sharma R, Lewis S, Wlodarski MW. DNA Repair Syndromes and Cancer: Insights Into Genetics and Phenotype Patterns. Front Pediatr. 2020;8:570084. [Crossref] [PubMed] [PMC]
- Cabana MD, Crawford TO, Winkelstein JA, Christensen JR, Lederman HM. Consequences of the delayed diagnosis of ataxia-telangiectasia. Pediatrics. 1998;102(1 Pt 1):98-100. [Crossref] [PubMed]
- Suarez F, Mahlaoui N, Canioni D, Andriamanga C, Dubois d'Enghien C, Brousse N, et al. Incidence, presentation, and prognosis of malignancies in ataxia-telangiectasia: a report from the French national registry of primary immune deficiencies. J Clin Oncol. 2015;33(2):202-8. [Crossref] [PubMed]
- Kaseb H, Rayi A, Hozayen S. Chromosome Instability Syndromes. 2022 Sep 19. In: StatPearls [Internet]. Treasure Island (FL): StatPearls Publishing; 2023 Jan-.
- Sabino Pinho de Oliveira B, Putti S, Naro F, Pellegrini M. Bone Marrow Transplantation as Therapy for Ataxia-Telangiectasia: A Systematic Review. Cancers (Basel). 2020;12(11):3207. [Crossref] [PubMed] [PMC]
- Di Siena S, Campolo F, Gimmelli R, Di Pietro C, Marazziti D, Dolci S, et al. Atm reactivation reverses ataxia telangiectasia phenotypes in vivo. Cell Death Dis. 2018;9(3):314. [Crossref] [PubMed] [PMC]
- Veenhuis S, van Os N, Weemaes C, et al. Ataxia-Telangiectasia. 1999 Mar 19 [Updated 2023 Oct 5]. In: Adam MP, Feldman J, Mirzaa GM, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2023. Available from: [Link]
- Carranza D, Torres-Rusillo S, Ceballos-Pérez G, Blanco-Jimenez E, Muñoz-López M, García-Pérez JL, et al. Reconstitution of the Ataxia-Telangiectasia Cellular Phenotype With Lentiviral Vectors. Front Immunol. 2018;9:2703. [Crossref] [PubMed] [PMC]
- Fiévet A, Bellanger D, Valence S, Mobuchon L, Afenjar A, Giuliano F, et al. Three new cases of ataxia-telangiectasia-like disorder: No impairment of the ATM pathway, but S-phase checkpoint defect. Hum Mutat. 2019;40(10):1690-9. [Crossref] [PubMed]
- Ragamin A, Yigit G, Bousset K, Beleggia F, Verheijen FW, de Wit MY, et al. Human RAD50 deficiency: Confirmation of a distinctive phenotype. Am J Med Genet A. 2020;182(6):1378-86. [Crossref] [PubMed] [PMC]
- Altmann T, Gennery AR. DNA ligase IV syndrome; a review. Orphanet J Rare Dis. 2016;11(1):137. [Crossref] [PubMed] [PMC]
- Buck D, Malivert L, de Chasseval R, Barraud A, Fondanèche MC, Sanal O, et al. Cernunnos, a novel nonhomologous end-joining factor, is mutated in human immunodeficiency with microcephaly. Cell. 2006;124(2):287-99. [Crossref] [PubMed]
- Esenboga S, Akal C, Karaatmaca B, Erman B, Dogan S, Orhan D, et al. Two siblings with PRKDC defect who presented with cutaneous granulomas and review of the literature. Clin Immunol. 2018;197:1-5. [Crossref] [PubMed]
- Bythell-Douglas R, Deans AJ. A Structural Guide to the Bloom Syndrome Complex. Structure. 2021;29(2):99-113. [Crossref] [PubMed]
- Schoenaker MHD, Takada S, van Deuren M, Dommering CJ, Henriët SSV, Pico I, et al. Considerations for radiotherapy in Bloom Syndrome: A case series. Eur J Med Genet. 2021;64(10):104293. [Crossref] [PubMed]
- Bhandari J, Thada PK, Puckett Y. Fanconi Anemia. 2022 Aug 10. In: StatPearls [Internet]. Treasure Island (FL): StatPearls Publishing; 2023 Jan-.
- Mechilli M, Schinoppi A, Kobos K, Natarajan AT, Palitti F. DNA repair deficiency and acetaldehyde-induced chromosomal alterations in CHO cells. Mutagenesis. 2008;23(1):51-6. [Crossref] [PubMed]
- Alter BP, Giri N, Savage SA, Rosenberg PS. Cancer in the National Cancer Institute inherited bone marrow failure syndrome cohort after fifteen years of follow-up. Haematologica. 2018;103(1):30-9. [Crossref] [PubMed] [PMC]
- Sekinaka Y, Mitsuiki N, Imai K, Yabe M, Yabe H, Mitsui-Sekinaka K, et al. Common Variable Immunodeficiency Caused by FANC Mutations. J Clin Immunol. 2017;37(5):434-44. [Crossref] [PubMed]
- Nicoletti E, Rao G, Bueren JA, Río P, Navarro S, Surrallés J, et al. Mosaicism in Fanconi anemia: concise review and evaluation of published cases with focus on clinical course of blood count normalization. Ann Hematol. 2020;99(5):913-24. [Crossref] [PubMed] [PMC]
- Fayez EA, Qazvini FF, Mahmoudi SM, Khoei S, Vesaltalab M, Teimourian S. Diagnosis of radiosensitive severe combined immunodeficiency disease (RS-SCID) by Comet Assay, management of bone marrow transplantation. Immunobiology. 2020;225(3):151961. [Crossref] [PubMed]
- Penninckx S, Pariset E, Cekanaviciute E, Costes SV. Quantification of radiation-induced DNA double strand break repair foci to evaluate and predict biological responses to ionizing radiation. NAR Cancer. 2021;3(4):zcab046. [Crossref] [PubMed] [PMC]
- Dvorak CC, Cowan MJ. Radiosensitive severe combined immunodeficiency disease. Immunol Allergy Clin North Am. 2010;30(1):125-42. [Crossref] [PubMed] [PMC]
- Gomolka M, Blyth B, Bourguignon M, Badie C, Schmitz A, Talbot C, et al. Potential screening assays for individual radiation sensitivity and susceptibility and their current validation state. Int J Radiat Biol. 2020;96(3):280-96. [Crossref] [PubMed]